Codon usage bias - Wikipedia

... It is generally acknowledged that codon preferences reflect a balance between mutational biases and natural selection for translational optimization. ... The nature of the codon usage-tRNA...
http://en.wikipedia.org/wiki/Codon_usage_bias

 

BioMed Central |Full text |Empirical codon substitution matrix

Skip to main content / 5-Jan-2008  / Top / Abstract / Background / Results ... Again, a codon substitution can involve up to three nucleotide base changes. ... A number greater than 1 means that on an average, the...
http://www.biomedcentral.com/1471-2105/6/134

 

Genome Biology |Full text |Comparative context analysis of codon pairs on an ORFeome scale

Log on / register / BioMed Central home | ... Codon context is highly biased in yeast. ... S. cerevisiae genome map of codon context. ... Codon context bias is organized in...
http://genomebiology.com/2005/6/3/R28

 

Algorithms for Molecular Biology |Full text |P-value based visualization of codon usage data

Skip to main content / 22-Dec-2007  / Home | ... Both problems can be addressed by multivariate analysis of codon usage data. ... In general, codon usages show organism-specific patterns. ... We start...
http://www.almob.org/content/1/1/10

 

Theoretical Biology and Medical Modelling |Full text |Indications that "codon boundaries" are physico-chemically defined and that protein-folding information

... This might suggest an additional explanation of codon redundancy. ... Free folding energies in different codon residues. ... FFE associated with codon positions vs. protein...
http://www.tbiomed.com/content/3/1/28

 

Single base substitution in codon 74 of the MD rat myelin proteolipid protein gene.

... Single base substitution in codon 74 of the MD rat myelin proteolipid protein gene. ... The only consistent sequence difference between these and normal rat sequences was the substitution of a C for an A at the first...
http://www.arclab.org/medlineupdates/abstract_1702593.html

 

Position dependent CCGCG_CGCGG

From Table IIa: Position-dependent, orientation-independent pentamers / CCGCG and/or CGCGG / are found in the upstream regions of these cell cycle-regulated yeast genes in the following intervals: ... s: -103 to -5 nt upstream of the ATG start...
http://www.ncbi.nlm.nih.gov/CBBresearch/Landsman/Cell_cycle_data/Table_II/CCGCG_CGCGG.html

 

A polymorphism at codon 31 of gene p21 is not associated with primary open angle glaucoma in Caucasians owistut

Directory Menu Information / Economic and Finacial Growth / Category: ... Frequency distribution of p21 codon 31 polymorphisms in POAG patients and healthy subjects. ... 13. Chen WC, Wu HC, Hsu CD, Chen HY, Tsai FJ: p21 gene...
http://www.infodezine.com/tutorials/A_polymorphism__23801_BMC-Ophthalmology_article.html

 

Virology Journal |Full text |Differential expression of papillomavirus L1 proteins encoded by authentic and codon modified L1 genes in methylcellulose-treated

Skip to main content ... Conversely, methylcellulose dramatically decreased L1 protein expression in KCs transfected with two codon-modified L1 expression constructs. ... Methylcellulose did not influence L1 transcription but...
http://www.virologyj.com/content/4/1/127

 

Variant Creutzfeldt-Jakob disease: prion protein genotype analysis of positive appendix tissue samples from a retrospective prevalence study -- Ironside et al.

Jump to: Page Content, Site Navigation, Site Search, ... These results give the first indication that PRNP codon 129 valine homozygotes may be susceptible to vCJD infection. ... Creutzfeldt-Jakob Disease, Prion Protein Gene...
http://www.bmj.com/cgi/content/full/332/7551/1186

 
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